36 research outputs found

    Microwave Spectroscopy of Thermally Excited Quasiparticles in YBa_2Cu_3O_{6.99}

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    We present here the microwave surface impedance of a high purity crystal of YBa2Cu3O6.99YBa_2Cu_3O_{6.99} measured at 5 frequencies between 1 and 75 GHz. This data set reveals the main features of the conductivity spectrum of the thermally excited quasiparticles in the superconducting state. Below 20 K there is a regime of extremely long quasiparticle lifetimes, due to both the collapse of inelastic scattering below TcT_c and the very weak impurity scattering in the high purity BaZrO3BaZrO_3-grown crystal used in this study. Above 20 K, the scattering increases dramatically, initially at least as fast as T4T^4.Comment: 13 pages with 10 figures. submitted to Phys Rev

    Microwave Electrodynamics of Electron-Doped Cuprate Superconductors

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    We report microwave cavity perturbation measurements of the temperature dependence of the penetration depth, lambda(T), and conductivity, sigma(T) of Pr_{2-x}Ce_{x}CuO_{4-delta} (PCCO) crystals, as well as parallel-plate resonator measurements of lambda(T) in PCCO thin films. Penetration depth measurements are also presented for a Nd_{2-x}Ce_{x}CuO_{4-delta} (NCCO) crystal. We find that delta-lambda(T) has a power-law behavior for T<T_c/3, and conclude that the electron-doped cuprate superconductors have nodes in the superconducting gap. Furthermore, using the surface impedance, we have derived the real part of the conductivity, sigma_1(T), below T_c and found a behavior similar to that observed in hole-doped cuprates.Comment: 4 pages, 4 figures, 1 table. Submitted to Physical Review Letters revised version: new figures, sample characteristics added to table, general clarification give

    Structural Basis for the Inhibitory Effects of Ubistatins in the Ubiquitin-Proteasome Pathway

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    The discovery of ubistatins, small molecules that impair proteasomal degradation of proteins by directly binding to polyubiquitin, makes ubiquitin itself a potential therapeutic target. Although ubistatins have the potential for drug development and clinical applications, the lack of structural details of ubiquitin-ubistatin interactions has impeded their development. Here, we characterized a panel of new ubistatin derivatives using functional and binding assays. The structures of ubiquitin complexes with ubistatin B and hemi-ubistatin revealed direct interactions with ubiquitin's hydrophobic surface patch and the basic/polar residues surrounding it. Ubistatin B binds ubiquitin and diubiquitin tighter than a high-affinity ubiquitin receptor and shows strong preference for K48 linkages over K11 and K63. Furthermore, ubistatin B shields ubiquitin conjugates from disassembly by a range of deubiquitinases and by the 26S proteasome. Finally, ubistatin B penetrates cancer cells and alters the cellular ubiquitin landscape. These findings highlight versatile properties of ubistatins and have implications for their future development and use in targeting ubiquitin-signaling pathways

    NMR studies revealed structural basis for the inhibitory effects of ubistatins in the ubiquitin-mediated signaling pathways

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    International audienceUbiquitination is a critical protein post-translational modification involved in a variety of vital processes in eukaryotic cells. The discovery of ubistatins [1], small molecules that impair proteasomal degradation of proteins by directly binding to (poly)ubiquitin upstream of the proteasome, makes ubiquitin itself a potential therapeutic target. Although ubistatins have the potential for drug development and clinical applications, the lack of structural details of ubiquitin-ubistatin interactions has impeded their development. To address this deficiency, a panel of new ubistatin derivatives was synthesized and characterized using functional and NMR-based binding assays [2]. We found that the most active compounds contain strongly acidic groups. We then used NMR and small-angle neutron scattering (SANS) to determine the structures of ubiquitin complexes with ubistatin B and hemi-ubistatin B. These structures revealed direct interactions of ubistatins with ubiquitin’s hydrophobic surface-patch and the basic/polar residues surrounding it, which were confirmed by site-directed mutagenesis. Our results show that ubistatin B binds ubiquitin and di-ubiquitin tighter than a high-affinity ubiquitin-receptor, the UBA domain from the proteasomal shuttle protein ubiquilin-1, and shows clear preference for ubiquitin chains linked via K48 over those linked via K11 or K63. The 15N relaxation and SANS data revealed unexpected binding stoichiometries and structural arrangements of ubiquitin or di-ubiquitins in those complexes. Furthermore, through binding to ubiquitin, ubistatin B shields ubiquitin conjugates from disassembly by a range of deubiquitinases, including the 26S proteasome.Finally, we found that ubistatin B penetrates human cancer cells and perturbs the cellular ubiquitin landscape. These findings highlight versatile properties of ubistatins and have implications for their future development and use in targeting ubiquitin-mediated signaling pathways. Combined with the earlier observations that ubistatins can arrest the cell cycle, producing effects similar to proteasome inhibitors [1]), our structural data suggest that the ubiquitin signal is a plausible candidate for therapeutic intervention in the ubiquitin-proteasome pathway
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